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works very slow
I wrote this module in C.
I know C language very badly, before I on it wrote nothing.
In a variant
PyArg_ParseTuple (args, "s", &str))
everything works as expected, but I need to use instead of s s* because elements can contain embeded null, but if I change s to s* when calling python crash
PyArg_ParseTuple (args, "s*", &str)) // crash
Maybe some beginner like me want to use my example as a start to write something of his own, so bring all the information to be used in this example on Windows.
Parsing arguments and building values on page http://docs.python.org/dev/c-api/arg.html
test_xor.c
#include <Python.h>
static PyObject* fast_xor(PyObject* self, PyObject* args)
const char* str ;
int i;
if (!PyArg_ParseTuple(args, "s", &str))
return NULL;
for(i=0;i<sizeof(str);i++) {str[i]^=55;};
return Py_BuildValue("s", str);
static PyMethodDef fastxorMethods[] =
{"fast_xor", fast_xor, METH_VARARGS, "fast_xor desc"},
{NULL, NULL, 0, NULL}
PyMODINIT_FUNC
initfastxor(void)
(void) Py_InitModule("fastxor", fastxorMethods);
test_xor.py
import fastxor
a=fastxor.fast_xor("World") # it works with s instead s*
print a
a=fastxor.fast_xor("Wo\0rld") # It does not work with s instead s*
compile.bat
rem use http://bellard.org/tcc/
tiny_impdef.exe C:\Python26\python26.dll
tcc -shared test_xor.c python26.def -IC:\Python26\include -LC:\Python26\libs -ofastxor.pyd
test_xor.py
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You don't need build an extension module to do this quickly, you can use NumPy. But for your question, you need some c code like this:
#include <Python.h>
#include <stdlib.h>
static PyObject * fast_xor(PyObject* self, PyObject* args)
const char* str;
char * buf;
Py_ssize_t count;
PyObject * result;
int i;
if (!PyArg_ParseTuple(args, "s#", &str, &count))
return NULL;
buf = (char *)malloc(count);
for(i=0;i<count;i++)
buf[i]=str[i] ^ 55;
result = Py_BuildValue("s#", buf, count);
free(buf);
return result;
You can't change the content of string object, because string in Python is immutable. You can use "s#" to get the char *
pointer and the buffer length.
If you can use NumPy:
In [1]: import fastxor
In [2]: a = "abcdsafasf12q423\0sdfasdf"
In [3]: fastxor.fast_xor(a)
Out[3]: 'VUTSDVQVDQ\x06\x05F\x03\x05\x047DSQVDSQ'
In [5]: import numpy as np
In [6]: (np.frombuffer(a, np.int8)^55).tostring()
Out[6]: 'VUTSDVQVDQ\x06\x05F\x03\x05\x047DSQVDSQ'
In [7]: a = a*10000
In [8]: %timeit fastxor.fast_xor(a)
1000 loops, best of 3: 877 us per loop
In [15]: %timeit (np.frombuffer(a, np.int8)^55).tostring()
1000 loops, best of 3: 1.15 ms per loop
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An alternative approach is to use PyObject_GetBuffer
. The module below defines fast_xor
for any object that supports the buffer protocol, and fast_xor_inplace
for objects that have writable buffers, such as bytearray
. This version returns None
. I also added a 2nd unsigned char
argument with a default value of 55.
Example:
>>> s = 'abc'
>>> b = bytearray(s)
>>> fast_xor(s), fast_xor(s, 0x20)
('VUT', 'ABC')
>>> fast_xor_inplace(b, 0x20)
bytearray(b'ABC')
>>> fast_xor_inplace(s)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
BufferError: Object is not writable.
>>> fast_xor(b, 256)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
OverflowError: unsigned byte integer is greater than maximum
Source:
#include <Python.h>
static PyObject *fast_xor_inplace(PyObject *self, PyObject *args)
PyObject *arg1;
unsigned char arg2 = 55;
Py_buffer buffer;
char *buf;
int i;
if (!PyArg_ParseTuple(args, "O|b:fast_xor_inplace", &arg1, &arg2))
return NULL;
if (PyObject_GetBuffer(arg1, &buffer, PyBUF_WRITABLE) < 0)
return NULL;
buf = buffer.buf;
for(i=0; i < buffer.len; i++)
buf[i] ^= arg2;
PyBuffer_Release(&buffer);
Py_INCREF(Py_None);
return Py_None;
static PyObject *fast_xor(PyObject *self, PyObject *args)
PyObject *arg1;
unsigned char arg2 = 55;
PyObject *result;
Py_buffer buffer;
char *buf, *str;
int i;
if (!PyArg_ParseTuple(args, "O|b:fast_xor", &arg1, &arg2))
return NULL;
if (PyObject_GetBuffer(arg1, &buffer, PyBUF_SIMPLE) < 0)
return NULL;
result = PyString_FromStringAndSize(NULL, buffer.len);
if (result == NULL)
return NULL;
buf = buffer.buf;
str = PyString_AS_STRING(result);
for(i=0; i < buffer.len; i++)
str[i] = buf[i] ^ arg2;
PyBuffer_Release(&buffer);
return result;
static PyMethodDef fastxorMethods[] =
{"fast_xor", fast_xor, METH_VARARGS, "fast xor"},
{"fast_xor_inplace", fast_xor_inplace, METH_VARARGS, "fast inplace xor"},
{NULL, NULL, 0, NULL}
PyMODINIT_FUNC
initfastxor(void)
Py_InitModule3("fastxor", fastxorMethods, "fast xor functions");
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This can be done very quickly using numpy. You're unlikely to get substantially faster hand-rolling your own xor routine in C:
In [1]: import numpy
In [2]: data = numpy.uint8(numpy.random.randint(0, 256, 10000))
In [3]: timeit xor_data = numpy.bitwise_xor(data, 55)
100000 loops, best of 3: 17.4 us per loop
If you're using a big dataset (say 100 million points), it's favourably comparable to the times you have quoted for your code:
In [12]: data = numpy.uint8(numpy.random.randint(0, 256, 100000000))
In [13]: timeit xor_data = numpy.bitwise_xor(data, 55)
1 loops, best of 3: 198 ms per loop
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Do not use a for
-loop. Use a list comprehension instead, they are much faster:
In [1]: import random
In [2]: t = bytearray([random.randint(0,255) for i in xrange(10000)])
In [3]: u = bytearray([b^55 for b in t])
This is very fast:
In [11]: %timeit u = bytearray([b^55 for b in t])
1000 loops, best of 3: 1.36 ms per loop
That's not really slow. For 1 MB (10**6 bytes) it takes around 130 ms.
Of course using numpy as Henry Gomersall answered is the better solution.
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